Information for 1-AKCTGGBCVGCAGCTG (Motif 1)

T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G T G A C G A C T A C T G A T G C A G C T T C A G T A G C T A G C A G T C T C G A A T C G G T A C A C G T
p-value:1e-19
log p-value:-4.457e+01
Information Content per bp:1.626
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif132.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets58.5 +/- 21.0bp
Average Position of motif in Background51.4 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:1
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---AKCTGGBCVGCAGCTG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.77
Offset:7
Orientation:reverse strand
Alignment:AKCTGGBCVGCAGCTG-
-------CAGCAGCTGN
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.77
Offset:6
Orientation:forward strand
Alignment:AKCTGGBCVGCAGCTG--
------NNVVCAGCTGBN
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.77
Offset:8
Orientation:forward strand
Alignment:AKCTGGBCVGCAGCTG
--------ANCAGCTG
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.76
Offset:9
Orientation:reverse strand
Alignment:AKCTGGBCVGCAGCTG---
---------GCAGCTGTNN
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.76
Offset:7
Orientation:forward strand
Alignment:AKCTGGBCVGCAGCTG-
-------NAHCAGCTGD
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.75
Offset:6
Orientation:reverse strand
Alignment:AKCTGGBCVGCAGCTG--
------NNAGCAGCTGCT
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.75
Offset:7
Orientation:reverse strand
Alignment:AKCTGGBCVGCAGCTG-
-------NAACAGCTGT
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.75
Offset:8
Orientation:forward strand
Alignment:AKCTGGBCVGCAGCTG---
--------GACAGCTGCAG
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:AKCTGGBCVGCAGCTG--
-----NGNGACAGCTGCN
 T G C A C A T G T A G C A C G T A C T G A T C G A T C G A G T C T C G A T A C G A G T C C T G A A C T G T G A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A