p-value: | 1e-13 |
log p-value: | -3.200e+01 |
Information Content per bp: | 1.741 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 46.8 +/- 22.6bp |
Average Position of motif in Background | 30.8 +/- 24.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY -CTGTTGCTAGGS--- |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY- --KGTTGCTAGGMAACA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY NNCGTTGCTATGGNN- |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY NCCGTTGCTANGNGN- |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY NNNGTAACTANGNNA- |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGYGTKGCSAGGCTCY--- NTNNNNNGTTGCTANGGNNCANA |
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PB0180.1_Sp4_2/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGYGTKGCSAGGCTCY CAAAGGCGTGGCCAG----- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY ----TGCCCAGNHW-- |
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KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer
Match Rank: | 9 |
Score: | 0.48 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGYGTKGCSAGGCTCY MKGGGYGTGGCC------- |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGYGTKGCSAGGCTCY---- ----CTACTAGGATGTNNTN |
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