Information for 14-GCGTGWTGCT (Motif 36)

A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
Reverse Opposite:
C G T A A T C G G T A C C G T A C G T A A G T C C G T A G T A C A C T G G T A C
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif64.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets52.0 +/- 24.4bp
Average Position of motif in Background47.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCGTGWTGCT
TGCGTG-----
 A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGWTGCT
TTGCGTGCVA--
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------GCGTGWTGCT--
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGWTGCT
NCACGTGACN--
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGTGWTGCT
GGACGTGC----
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGWTGCT
NNCGCGTGNN---
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGWTGCT-
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGWTGCT-
CCACCTGTTGCAT
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

MLX/MA0663.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCGTGWTGCT
ATCACGTGAT---
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGTGWTGCT
RTACGTGC----
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G A T A C G T A C T G A T G C A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T