Information for 10-AGAGGAGAGA (Motif 31)

G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A
Reverse Opposite:
A G C T A G T C G A C T A G T C G A C T A T G C A G T C A C G T A G T C C A G T
p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.819
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif833.5
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets48.1 +/- 30.0bp
Average Position of motif in Background51.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA
--AGGTGTGA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA
--AGGTGTGA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAGGAGAGA-
-AAGGTGTGAA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A A C G T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA
--AGGTGTGA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAGGAGAGA----
-AAGGTGTGAAAAT
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA
--AGGTGTGA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA
--AGGTGTGA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA--
--AGGTGTGAAA
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGA--
--AGGTGTGAAM
 G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGGAGAGA-----
GAAAAGGTGTGAAAATT
 A C G T A C G T G T C A T C A G C G T A C T A G T A C G C T G A C T A G C T G A C T A G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T