Information for 15-VCCCTGGTTTCCW (Motif 27)

T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A
Reverse Opposite:
G C A T A C T G C T A G C T G A C G T A G T C A A G T C G A T C C G T A A C T G C T A G A T C G A G T C
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.734
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif76.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets39.2 +/- 26.2bp
Average Position of motif in Background53.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-VCCCTGGTTTCCW-
TACCCTAGTTACCGA
 A C G T T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--VCCCTGGTTTCCW-
GAGCCCTTGTCCCTAA
 A C G T A C G T T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:VCCCTGGTTTCCW-
----TGGTTTCAGT
 T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---VCCCTGGTTTCCW
GCACCCCTGGGTGCC-
 A C G T A C G T A C G T T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:VCCCTGGTTTCCW----
NNNTTGGTTTCGNTNNN
 T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:VCCCTGGTTTCCW----
--TNTGGTTTCGATACN
 T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:VCCCTGGTTTCCW-----
---NTGGTTTCGGTTNNN
 T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----VCCCTGGTTTCCW-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:VCCCTGGTTTCCW-----
----CAGTTTCGNTTCTN
 T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:VCCCTGGTTTCCW
-CCATTGTTTT--
 T C A G A T G C G A T C A G T C A C G T C A T G C T A G A C G T A C G T A G C T A G T C A G T C C G T A
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T