Information for 12-TGCTCCAGGCAACWCC (Motif 13)

C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
Reverse Opposite:
C T A G A T C G C G T A A C T G A C G T A C G T A T C G A G T C A G T C A C G T A C T G A T C G C G T A C A T G A T G C G C T A
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.754
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.2 +/- 9.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGCTCCAGGCAACWCC
-----AAGGCAAGTGT
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCCAGGCAACWCC
ANTGCCTGAGGCAAN---
 A C G T A C G T C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGCTCCAGGCAACWCC-
-------GGAAATTCCC
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGCTCCAGGCAACWCC
AAGGKGRCGCAGGCA-----
 A C G T A C G T A C G T A C G T C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCTCCAGGCAACWCC
---NACAGGAAAT---
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCTCCAGGCAACWCC
AGCCTCAGGCA-----
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGCTCCAGGCAACWCC-----
-----NNGGCGACACCTCNNN
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TGCTCCAGGCAACWCC-
-------GGAAATCCCC
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGCTCCAGGCAACWCC
---NACAGGAAAT---
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCTCCAGGCAACWCC
--CTTCTGGGAAA---
 C G A T A T C G G T A C C G A T T A G C A G T C G T C A A C T G A C T G A T G C C G T A T C G A G T A C C G A T T A G C A G T C
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T