Information for 10-CCGAGATGTTAATACS (Motif 9)

A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
Reverse Opposite:
T A G C T A C G A G C T C G T A C A G T G A C T G C T A C T G A A T G C G C T A C A G T A T G C A C G T A G T C A C T G A T C G
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.598
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 23.5bp
Average Position of motif in Background74.8 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0035.1_Gsc/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGAGATGTTAATACS----
---AATCGTTAATCCCTTTA
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGAGATGTTAATACS
---AGGTGTTAAT---
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGAGATGTTAATACS--
---AGATGCTRCTRCCHT
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCGAGATGTTAATACS
TCCAGATGTT------
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCGAGATGTTAATACS
----TATGCWAATBAV
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCGAGATGTTAATACS
----TATGTAAATAT-
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCGAGATGTTAATACS
----TATGCAAAT---
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCGAGATGTTAATACS-
-------GCTAATCCCC
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCGAGATGTTAATACS
---ATATGCAAAT---
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCGAGATGTTAATACS
----TATGCAAAT---
 A T G C T A G C T A C G T G C A T A C G G T C A C A G T T A C G G A C T C G A T C G T A G T C A G A C T T C G A A T G C A T C G
A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T