Information for 3-ACTACAKTTCCCAGAA (Motif 3)

C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A
Reverse Opposite:
A G C T A G C T G T A C A G C T C T A G A C T G C T A G C T G A T G C A T G C A A G C T A C T G A C G T C G T A A C T G A C G T
p-value:1e-20
log p-value:-4.624e+01
Information Content per bp:1.752
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif70.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets41.0 +/- 23.4bp
Average Position of motif in Background42.5 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-ACTACAKTTCCCAGAA---
AACTACAATTCCCAGAATGC
 A C G T C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-ACTACAKTTCCCAGAA---
RACTACAACTCCCAGVAKGC
 A C G T C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ACTACAKTTCCCAGAA
ACTACAATTCCC----
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ACTACAKTTCCCAGAA-
------TTTCCCAGAAN
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACTACAKTTCCCAGAA
-----ATTTCCAAGAA
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACTACAKTTCCCAGAA-
------TTTCCTGGAAA
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACTACAKTTCCCAGAA----
-----ATTTCCCAGVAKSCY
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACTACAKTTCCCAGAA-
---NNNTTTCCTGGAAA
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T
A C G T A C G T A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACTACAKTTCCCAGAA
-----HTTTCCCASG-
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ACTACAKTTCCCAGAA--
----NNCTTCCNGGAAGN
 C G T A A G T C A C G T C G T A G T A C T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C T G T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C