Information for 12-CCACAGTTAATGT (Motif 23)

A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
Reverse Opposite:
C G T A A T G C C G T A A G C T C G A T C T G A C G T A A T G C A C G T A C T G A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 18.6bp
Average Position of motif in Background44.0 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACAGTTAATGT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACAGTTAATGT
NAAACCACAG-------
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGTTAATGT
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGTTAATGT
AAACCACAGC------
 A C G T A C G T A C G T A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCACAGTTAATGT
--GCACTTAA---
 A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCACAGTTAATGT-
--ACCGTTAACGGT
 A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T A C G T
A C G T A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCACAGTTAATGT-----
--NNAATTAATGACCNNN
 A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCACAGTTAATGT
-----GKTAATGR
 A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCACAGTTAATGT
BRRCVGTTDN---
 A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCACAGTTAATGT
---CAATTAA---
 A G T C A G T C G T C A A G T C C G T A A T C G A C G T A G C T C G T A C T G A A C G T T A C G A C G T
A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T