p-value: | 1e-11 |
log p-value: | -2.558e+01 |
Information Content per bp: | 1.570 |
Number of Target Sequences with motif | 25.0 |
Percentage of Target Sequences with motif | 3.85% |
Number of Background Sequences with motif | 301.1 |
Percentage of Background Sequences with motif | 0.68% |
Average Position of motif in Targets | 47.1 +/- 30.4bp |
Average Position of motif in Background | 51.2 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.04 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCATGCCAA-- TTGCCATGGCAACC |
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NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCCATGCCAA-- --GGTGCCAAGT |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCATGCCAA-- TTGCCATGGCAACN |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCCATGCCAA ----TGCCAA |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCCATGCCAA- --CGTGCCAAG |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCATGCCAA- GTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCATGCCAA--- GTTGCCATGGCAACCG |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCCATGCCAA- KGTTGCCATGGCAAC |
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Hic1/MA0739.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCCATGCCAA-- ---ATGCCAACC |
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RFX2/MA0600.2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCCATGCCAA-- CGTTGCCATGGCAACG |
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