Information for 13-TGCGATAAAGGCCTTC (Motif 17)

C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
Reverse Opposite:
A C T G T C G A T C G A T A C G C A T G A G T C G T A C G A C T A C G T A C G T G T C A G A C T A G T C C T A G G T A C G C T A
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.676
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 24.9bp
Average Position of motif in Background42.3 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCGATAAAGGCCTTC
AAGCCATAAAA------
 A C G T C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCGATAAAGGCCTTC
-GCAATAAAA------
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCGATAAAGGCCTTC
--AGATAAGA------
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCGATAAAGGCCTTC
-NAGATAAGNN-----
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCGATAAAGGCCTTC
NBWGATAAGR------
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCGATAAAGGCCTTC
-CAGATAAGGN-----
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCGATAAAGGCCTTC
NVAGATAAGR------
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCGATAAAGGCCTTC
-GTCATAAAAN-----
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCGATAAAGGCCTTC
NCAGATAAGAANNN--
 C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCGATAAAGGCCTTC
NNGAGATAAGA------
 A C G T C A G T A C T G A G T C C T A G C T G A A C G T C G T A C G T A C T G A A C T G T C A G G T A C A G T C A C G T A C G T T A G C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T