Information for 10-ATGKKWAGGATWC (Motif 16)

C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C
Reverse Opposite:
A C T G C G T A C G T A A C G T A G T C A G T C A C G T C G T A G T C A G T A C A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.4 +/- 21.6bp
Average Position of motif in Background40.6 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATGKKWAGGATWC----
-CTACTAGGATGTNNTN
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATGKKWAGGATWC
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGKKWAGGATWC
TATGCWAATBAV--
 A C G T C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ATGKKWAGGATWC---
-----AAGGATATNTN
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ATGKKWAGGATWC-----
-TGAACCGGATTAATGAA
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ATGKKWAGGATWC-----
-TGAACCGGATTAATGAA
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATGKKWAGGATWC-----
-NTNNNAGGAGTCTCNTN
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ATGKKWAGGATWC--
-----VRGGATTARN
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ATGKKWAGGATWC-
------NGGATTAA
 C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ATGKKWAGGATWC
NTTGTTTACGTTNN
 A C G T C G T A C G A T A C T G A C T G A C G T C G A T C G T A A C T G A C T G C G T A A C G T C G A T G T A C
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G