Information for 6-CATGCTGGGA (Motif 14)

A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A
Reverse Opposite:
A C G T T A G C G A T C T G A C C T G A T C A G G T A C C G T A A C G T A T C G
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.699
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif7.70%
Number of Background Sequences with motif1086.6
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets42.6 +/- 23.6bp
Average Position of motif in Background50.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTGGGA--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CATGCTGGGA
CCTGCTGAGH
 A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTGGGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CATGCTGGGA---
RGSMTBCTGGGAAAT
 A C G T A C G T A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTGGGA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATGCTGGGA-
CATGCGGGTAC
 A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTGGGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CATGCTGGGA
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATGCTGGGA--
-CTTCTGGGAAA
 A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A A C G T A C G T
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CATGCTGGGA
TATGCGGGTA
 A T G C G T C A C G A T C A T G A G T C G A C T A C T G C T A G A T C G T G C A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A