Information for 4-RCDMGGGGGCCCTGSW (Motif 4)

C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
Reverse Opposite:
G C T A A T G C A G T C G T C A A C T G A T C G A C T G A G T C A T G C T A G C A T G C A T G C A C T G G T A C A T C G G A C T
p-value:1e-16
log p-value:-3.815e+01
Information Content per bp:1.703
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif36.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets40.2 +/- 15.8bp
Average Position of motif in Background53.9 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RCDMGGGGGCCCTGSW
TTGGGGGCGCCCCTAG
 C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RCDMGGGGGCCCTGSW-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RCDMGGGGGCCCTGSW-
--AAGGKGRCGCAGGCA
 C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----RCDMGGGGGCCCTGSW
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RCDMGGGGGCCCTGSW
NNNAAGGGGGCGGGNNN
 A C G T C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----RCDMGGGGGCCCTGSW
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RCDMGGGGGCCCTGSW
-GGCGGGGGCGGGGG-
 C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RCDMGGGGGCCCTGSW
---AGCGCGCC-----
 C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RCDMGGGGGCCCTGSW
--NCGCGGACGTTG--
 C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RCDMGGGGGCCCTGSW
--GGGCGGGACC----
 C T G A A T G C C A T G G T A C A T C G T A C G A T C G A T C G A C T G G T A C A T G C A G T C A C G T A C T G T A C G C G A T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T