Information for 6-GGCAGCAAAG (Motif 2)

C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G
Reverse Opposite:
A T G C C G A T G C A T A G C T C T A G A G T C A C G T A C T G A T G C A G T C
p-value:1e-19
log p-value:-4.537e+01
Information Content per bp:1.847
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.03%
Number of Background Sequences with motif791.6
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets50.1 +/- 22.4bp
Average Position of motif in Background49.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGCAAAG--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCAGCAAAG-
GTCAGCANNTN
 C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGCAAAG
TGAGTCAGCA---
 A C G T A C G T A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCAGCAAAG------
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCAGCAAAG-
-GGAACAAAGR
 C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCAAAG
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCAGCAAAG---
-ACATCAAAGGNA
 C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCAAAG---
AAAGATCAAAGGAA
 A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCAAAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCAGCAAAG-
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T C T A G A T C G A G T C C G T A C T A G A G T C C T G A C G T A C G T A A T C G A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T