Information for 9-CAGSAKCCTGCAA (Motif 10)

A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A
Reverse Opposite:
A C G T A G C T A C T G A G T C C T G A A C T G A C T G T G C A C G A T A T C G A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.836
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.8 +/- 24.4bp
Average Position of motif in Background57.1 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGSAKCCTGCAA
--ACATCCTGNT-
 A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CAGSAKCCTGCAA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGSAKCCTGCAA
ACCACATCCTGT--
 A C G T A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGSAKCCTGCAA
---CTTCCNGGAA
 A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGSAKCCTGCAA----
-TCGTACCCGCATCATT
 A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGSAKCCTGCAA---
--NCTTCCNGGAAGNN
 A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A A C G T A C G T A C G T
A C G T A C G T T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGSAKCCTGCAA-
----TACCCGCATN
 A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:8
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CAGSAKCCTGCAA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CAGSAKCCTGCAA
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGSAKCCTGCAA-
---GTACCCGCATN
 A G T C C G T A C T A G A T G C C G T A A C G T A G T C A G T C A G C T A C T G A G T C C T G A C G T A A C G T
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G