Information for 4-TGCGTSAAAGCAC (Motif 11)

C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C
Reverse Opposite:
C A T G A C G T A C T G G T A C A C G T A C G T C G A T A T C G G T C A A G T C A T C G A G T C C G T A
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.717
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif40.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets56.0 +/- 19.2bp
Average Position of motif in Background41.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0083.1_Tcf7_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCGTSAAAGCAC--
TATAGATCAAAGGAAAA
 A C G T A C G T C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCGTSAAAGCAC--
TATAGATCAAAGGAAAA
 A C G T A C G T C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTSAAAGCAC--
NNNAGATCAAAGGANNN
 A C G T A C G T C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCGTSAAAGCAC
AAAGATCAAAGGAA
 A C G T C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTSAAAGCAC--
NANAGATCAAAGGGNNN
 A C G T A C G T C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCGTSAAAGCAC----
AAGGCGAAATCATCGCA
 C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCGTSAAAGCAC
-ACATCAAAGG--
 C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCGTSAAAGCAC
-ACATCAAAGGNA
 C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGCGTSAAAGCAC--
-----CAAATCACTG
 C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCGTSAAAGCAC
--ACTGAAACCA-
 C G A T T C A G A T G C T A C G A C G T T A G C C G T A T G C A C G T A A C T G T G A C C G T A G T A C
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T