Information for 22-TGGCGTTTGCCCT (Motif 28)

A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 24.5bp
Average Position of motif in Background40.4 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT-
TGACCTTTGCCCTA
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT--
TGACCTTTGCCCTAN
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGGCGTTTGCCCT-
TGACCTTTGCCCCA
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT--
TGGACTTTGNNCTCN
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT---
TGGACTTTGNNCTNTG
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT-
TGACCTTTGACCTN
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT-
TGACCTTTGACCTC
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGTTTGCCCT--
GTTGACCTTTGACCTTT
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGCGTTTGCCCT-
TGACCTTTGACCCC
 A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGTTTGCCCT-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C