Information for 20-CWACCAAACKTMM (Motif 24)

A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
Reverse Opposite:
A C T G A C T G C G T A G T A C A C T G A C G T A C G T A C G T A C T G C T A G A C G T C G A T A C T G
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.845
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.5 +/- 17.8bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWACCAAACKTMM
GCGACCACACTG--
 A C G T A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWACCAAACKTMM
NWAACCACADNN--
 A C G T A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWACCAAACKTMM
CCAATCAA------
 A C G T A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CWACCAAACKTMM
--NANANAC----
 A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CWACCAAACKTMM
CCATCAATCAAA-----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CWACCAAACKTMM--
CAAATCCAGACATCACA
 A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CWACCAAACKTMM
NAAACCACAG----
 A C G T A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CWACCAAACKTMM
-AAACAAACATTC
 A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CWACCAAACKTMM
---CCAGACRSVB
 A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CWACCAAACKTMM
----CAAGCTT--
 A G T C C G T A C G T A A G T C A G T C C G T A G T C A C G T A A G T C C A T G C G A T G T A C G T A C
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T