Information for 17-GTGGCCCCTTCTG (Motif 21)

A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T G A G T C A A C T G A T C G A C T G A C T G A G T C A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 22.1bp
Average Position of motif in Background54.6 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTGGCCCCTTCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCCCCTTCTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCCTTCTG-
NNGCACCTTTCTCC
 A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGGCCCCTTCTG---
-GGCCYCCTGCTGDGH
 A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCCCCTTCTG
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGGCCCCTTCTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTGGCCCCTTCTG
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGGCCCCTTCTG--
---CCCCCTGCTGTG
 A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCCTTCTG
-TGACCYCT----
 A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCCCCTTCTG
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C T A G G T A C A G T C A T G C A G T C A C G T A G C T A G T C A C G T A C T G
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G