Information for 11-TGAADGGACTAAA (Motif 9)

G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A
Reverse Opposite:
A C G T A C G T A G C T C G T A C A T G A G C T G A T C G A T C G T A C A G C T C G A T G T A C C G T A
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.713
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.4 +/- 29.3bp
Average Position of motif in Background75.1 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGAADGGACTAAA----
-------GCTAAACGGT
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAADGGACTAAA----
TAGAGGGATTAAATTTC
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGAADGGACTAAA----
NANAGGGATTAATTATN
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGAADGGACTAAA---
TTAGAGGGATTAACAAT
 A C G T G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGAADGGACTAAA-
---AAGCCATAAAA
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T
A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGAADGGACTAAA---
-ARGAGGMCAAAATGW
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T
A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGAADGGACTAAA------
--AATGCAATAAAATTTAT
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGAADGGACTAAA----
TGAAGGGATTAATCATC
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TGAADGGACTAAA
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGAADGGACTAAA----
-AAAGGTAATAAAATTT
 G C A T C A T G C G T A C T G A C A G T C A T G C A T G T C G A G T A C C G A T C T G A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T