Information for 6-WGGGGGCAGTGTT (Motif 3)

C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
Reverse Opposite:
G C T A T G C A A G T C C G T A A G T C A C G T C T A G G T A C A G T C G A T C A G T C A G T C C G A T
p-value:1e-23
log p-value:-5.520e+01
Information Content per bp:1.805
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 19.9bp
Average Position of motif in Background54.8 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WGGGGGCAGTGTT
TNNGGGCAG----
 C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WGGGGGCAGTGTT
-AGAGGAAGTG--
 C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WGGGGGCAGTGTT
TTAAGAGGAAGTTA-
 A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WGGGGGCAGTGTT-
AGGGGGCGGGGCTG
 C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------WGGGGGCAGTGTT
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----WGGGGGCAGTGTT
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----WGGGGGCAGTGTT
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----WGGGGGCAGTGTT
TGTCAGGGGGCG-----
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:WGGGGGCAGTGTT
-AGCGGAAGTG--
 C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-WGGGGGCAGTGTT---
NNNANTGCAGTGCNNTT
 A C G T C G T A A C T G C T A G C T A G C T A G A C T G A G T C C G T A A C T G A C G T C T A G A C G T C A G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T