p-value: | 1e-7 |
log p-value: | -1.653e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.47% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 35.8 +/- 24.5bp |
Average Position of motif in Background | 57.6 +/- 11.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTCTCCATCAAG NCTGTCAATCAN- |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTCTCCATCAAG GSCTGTCACTCA-- |
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PH0134.1_Pbx1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTCTCCATCAAG----- -TCACCCATCAATAAACA |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTCTCCATCAAG SCTGTCAVTCAV- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCTCTCCATCAAG NSCACTYVAV---- |
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PB0139.1_Irf5_2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTCTCCATCAAG NNAATTCTCGNTNAN- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTCTCCATCAAG -CCATCAATCAAA |
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Dux/MA0611.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCTCTCCATCAAG ----CCAATCAA- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCTCTCCATCAAG AASCACTCAA----- |
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PH0026.1_Duxbl/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTCTCCATCAAG---- CGACCCAATCAACGGTG |
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