Information for 14-CKSMTTTCTTKTT (Motif 12)

A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A G T C A G T A C C G T A C G T A A C T G C G T A C G T A C G T A A C T G A T G C G T C A C T A G
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 30.5bp
Average Position of motif in Background60.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CKSMTTTCTTKTT-
--ACTTTCACTTTC
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CKSMTTTCTTKTT----
--NTNTTGTTGTTTGTN
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CKSMTTTCTTKTT
---ATTTCCTGTN
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CKSMTTTCTTKTT-----
-NNNNTTTTTTTTTNAAC
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CKSMTTTCTTKTT
---ATTTCCTGTN
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CKSMTTTCTTKTT-
--RSTTTCRSTTTC
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CKSMTTTCTTKTT--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CKSMTTTCTTKTT---
-NCNTTTGTTATTTNN
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CKSMTTTCTTKTT
--CCTTTGTTTT-
 A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CKSMTTTCTTKTT------
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T