Information for 13-AGTTTTGAAATGA (Motif 11)

C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
Reverse Opposite:
A C G T T A G C C G T A A C G T A C G T G A C T A G T C C G T A G T C A G T C A C G T A A G T C A G C T
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.805
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.7 +/- 29.1bp
Average Position of motif in Background49.6 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGTTTTGAAATGA
NATTGTGCAAT--
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTTTTGAAATGA
--TTATGCAAT--
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTTTTGAAATGA
-RTTATGYAAB--
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTTTTGAAATGA
-GTTGCGCAAT--
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTTGAAATGA--
NNNTATTGAATTGNNN
 A C G T C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTTTGAAATGA
NATGTTGCAA---
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTTGAAATGA
ANATTTTTGCAANTN
 A C G T A C G T C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTTTTGAAATGA
CGGTTTCAAA---
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTTTTGAAATGA-----
-AAGGCGAAATCATCGCA
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTTTTGAAATGA
-CCTTTGATGT--
 C T G A A C T G C G A T C A G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G T G C A
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T