Information for 5-AAGGGCGCCC (Motif 3)

G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C T A G A T G C T A G C G T A C A G C T A C G T
p-value:1e-16
log p-value:-3.756e+01
Information Content per bp:1.850
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif68.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets58.4 +/- 24.4bp
Average Position of motif in Background52.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGCGCCC----
NNNGGGGCGCCCCCNN
 A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCGCCC---
ATAAGGGCGCGCGAT
 A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AAGGGCGCCC
-AGCGCGCC-
 G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCGCCC---
ATAAAGGCGCGCGAT
 A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCGCCC-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGGCGCCC--
TTTGGCGCCAAA
 G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCGCCC----
AAAATGGCGCCATTTT
 A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGCGCCC----
NCANGCGCGCGCGCCA
 A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCGCCC-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGGCGCCC------
GGGTGTGCCCAAAAGG
 G T C A C T G A A C T G A T C G A T C G G A T C T C A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G