Information for 5-TKTGAAAYWY (Motif 6)

A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
Reverse Opposite:
T C A G C G A T T C A G G A C T A C G T C A G T A T G C G C T A G T C A T C G A
p-value:1e-11
log p-value:-2.577e+01
Information Content per bp:1.485
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.44%
Number of Background Sequences with motif1081.5
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets50.3 +/- 29.1bp
Average Position of motif in Background51.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TKTGAAAYWY
TTTGAAACCG
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TKTGAAAYWY
-TTGACAG--
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TKTGAAAYWY
NATTGTGCAAT--
 A C G T A C G T A C G T A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKTGAAAYWY
KTTCACACCT
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TKTGAAAYWY-
-TTGCAACATN
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TKTGAAAYWY
-TTGACAGG-
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TKTGAAAYWY
ACTGAAACCA
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TKTGAAAYWY--
--GGAAATTCCC
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TKTGAAAYWY-
AGATGCAATCCC
 A C G T A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TKTGAAAYWY-
TTTCACACCTN
 A G C T C A G T C G A T T A C G G T C A T G C A C T G A A G T C G C T A A G T C A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T