Information for 4-GSCWSWGTCTCWGAGS (Motif 5)

A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
Reverse Opposite:
A T G C A G T C A G C T G T A C C G T A A C T G C G T A A C T G C G T A A G T C C G T A A T C G G C A T A C T G A T G C A G T C
p-value:1e-11
log p-value:-2.654e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 23.3bp
Average Position of motif in Background30.3 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GSCWSWGTCTCWGAGS-
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GSCWSWGTCTCWGAGS
-GCTCGGSCTC-----
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GSCWSWGTCTCWGAGS
GTCACGCTCNCTGA--
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GSCWSWGTCTCWGAGS-
----CTGTCTGTCACCT
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GSCWSWGTCTCWGAGS--
-NTNNCGTATCCAAGTNN
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G A C G T A C G T
A C G T C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GSCWSWGTCTCWGAGS
-CCATTGTTTT-----
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GSCWSWGTCTCWGAGS
----CTGTCTGG----
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:GSCWSWGTCTCWGAGS-
-----TGTCTGDCACCT
 A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GSCWSWGTCTCWGAGS
TGCCTGAGGCN------
 A C G T A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GSCWSWGTCTCWGAGS
NGCCTNAGGCN------
 A C G T A C T G A T C G A G T C C G T A A T G C C G A T A C T G C G A T T A G C A C G T A G T C C G A T A C T G C T G A A C T G A T C G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T