Information for 6-TATCAGCCAG (Motif 12)

A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A T C G A G T C A C G T A T C G C T G A C G A T G T C A
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.839
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif115.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets60.2 +/- 27.8bp
Average Position of motif in Background50.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TATCAGCCAG
--BCAGACWA
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TATCAGCCAG
--CCAGACAG
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATCAGCCAG----
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TATCAGCCAG---
---ATGCCAGACN
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATCAGCCAG
AGGTGNCAGACAG
 A C G T A C G T A C G T A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATCAGCCAG-------
--SCAGYCADGCATGAC
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TATCAGCCAG
---CAGCC--
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TATCAGCCAG
----TGCCAA
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TATCAGCCAG--
--TGAGTCAGCA
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TATCAGCCAG--
--CCAGACRSVB
 A C G T G C T A A G C T A T G C C G T A A C T G T A G C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C