Information for 13-AGCCCAAGGTAGG (Motif 9)

C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
Reverse Opposite:
A G T C A T G C A C G T G T C A A G T C A G T C A G C T A C G T A C T G A C T G A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 20.2bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCCCAAGGTAGG
AGCCTCAGGCA--
 C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCCCAAGGTAGG
AGCCTCAGGCA--
 C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCCCAAGGTAGG
CGCCTCAGGCA--
 C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCCAAGGTAGG
-TCCCNNGGGACN
 C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAAGGTAGG
GTCCCCAGGGGA--
 A C G T C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGCCCAAGGTAGG---
-----CAGGTAAGTAT
 C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAAGGTAGG-
AAGTTCAAGGTCAGC
 A C G T C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCCCAAGGTAGG
AGGTCAAGGTCA-
 C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAAGGTAGG
CCGCCCAAGGGCAG
 A C G T C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAAGGTAGG
ATTCCCAAGGGAAT
 A C G T C G T A A C T G A G T C A G T C A G T C C G T A C T G A A C T G A C T G A C G T C G T A A T C G A C T G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T