Information for 6-TSYTTTTTAAAARAKS (Motif 6)

A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
Reverse Opposite:
A T C G G T C A A G C T A G C T A C G T A C G T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T A G A T G C C G T A
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.2 +/- 30.0bp
Average Position of motif in Background83.8 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TSYTTTTTAAAARAKS
NNNTTTNTAATACNG-
 A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TSYTTTTTAAAARAKS
TCTTTANTAATANN--
 A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TSYTTTTTAAAARAKS
NNNNTTTTTTTTTNAAC---
 A C G T A C G T A C G T A C G T A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TSYTTTTTAAAARAKS
---NATTCAAAT----
 A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TSYTTTTTAAAARAKS
-CGGTTTCAAA-----
 A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TSYTTTTTAAAARAKS
-NNTTTTTCTTATNT-
 A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TSYTTTTTAAAARAKS
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TSYTTTTTAAAARAKS
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TSYTTTTTAAAARAKS
----TTTTATTRGN--
 A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TSYTTTTTAAAARAKS
NTNTTGTTGTTTGTN-----
 A C G T A C G T A C G T A C G T A C G T A T C G G A C T A G C T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T G A A C G T A T G C
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T A C G T A C G T A C G T