Information for 21-AGCAGCAGCTGCT (Motif 35)

C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
Reverse Opposite:
G T C A C T A G A T G C C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C T G A G T C A G C T
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.6 +/- 36.6bp
Average Position of motif in Background55.0 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGCTGCT---
NNNNAGCAGCTGCTGAN
 A C G T C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT
---AGCAGCTGCT
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT
-NNAGCAGCTGCT
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:forward strand
Alignment:AGCAGCAGCTGCT
---CGCAGCTGCG
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT
--CAGCAGCTGN-
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT
--NNGCAGCTGTC
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT
NGNGACAGCTGCN
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT
--NNGCAGCTGTT
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGCAGCAGCTGCT
ADGGYAGYAGCATCT
 A C G T A C G T C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGCAGCAGCTGCT-
----GCAGCTGTNN
 C T G A A C T G A G T C G T C A A C T G A G T C C G T A C T A G A G T C C G A T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T