Information for 20-TCCCTGTGTTAGT (Motif 34)

A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
Reverse Opposite:
C T G A A G T C A C G T C G T A C G T A A T G C C G T A A G T C C G T A C T A G A C T G A C T G C G T A
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 27.6bp
Average Position of motif in Background24.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCCCTGTGTTAGT---
-NCNTTTGTTATTTNN
 A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCCTGTGTTAGT
--GCTGTG-----
 A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCCTGTGTTAGT
--CCTTTGTT---
 A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTGTGTTAGT
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTGTGTTAGT
ACTTCCTGTT-----
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTGTGTTAGT--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCCCTGTGTTAGT
---CTTTGT----
 A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTGTGTTAGT--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTGTGTTAGT
ATTTCCTGTN-----
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCCCTGTGTTAGT
-NCCATTGTTC--
 A C G T A G T C G T A C A G T C A C G T A C T G A C G T A T C G A C G T A C G T C G T A A C T G A G C T
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T