Information for 23-RGGGGTTYMCTGTCTT (Motif 31)

C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
Reverse Opposite:
C G T A C G T A A T C G C G T A A G T C G T C A A C T G A C T G C T A G G T C A C G T A A T G C G T A C A G T C A G T C G A T C
p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.883
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.7 +/- 25.2bp
Average Position of motif in Background61.4 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGGGGTTYMCTGTCTT
GGGGATTTCC------
 C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------RGGGGTTYMCTGTCTT
NNNATTGGGGGTNTCCT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RGGGGTTYMCTGTCTT
GGGAATTTCC------
 C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RGGGGTTYMCTGTCTT
GGGGATTTCC------
 C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RGGGGTTYMCTGTCTT
----ATTTCCTGTN--
 C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-RGGGGTTYMCTGTCTT
NGGGGATTTCCC-----
 A C G T C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RGGGGTTYMCTGTCTT
GCTGGGGGGTACCCCTT---
 A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:RGGGGTTYMCTGTCTT
----ATTTCCTGTN--
 C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RGGGGTTYMCTGTCTT
AGGGGGATTAGCTGCC--
 A C G T A C G T C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RGGGGTTYMCTGTCTT--
--GAGTTCATTGAGTTCA
 C T A G A C T G A C T G A C T G A T C G A C G T A C G T A G T C T G A C A G T C A C G T T A C G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A