Information for 15-CACSTCCWRGASG (Motif 26)

A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
Reverse Opposite:
A G T C T A C G C G A T A G T C A G T C G C T A A C T G A C T G C G T A A T G C A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.880
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 29.6bp
Average Position of motif in Background71.2 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACSTCCWRGASG
GCACGTNC------
 A C G T A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACSTCCWRGASG
ACCACATCCTGT---
 A C G T A C G T A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACSTCCWRGASG
CACTTCCTGT---
 A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACSTCCWRGASG
GATAACATCCTAGTAG
 A C G T A C G T A C G T A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACSTCCWRGASG
GCACGTAY------
 A C G T A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACSTCCWRGASG
GCACGTACCC----
 A C G T A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACSTCCWRGASG
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACSTCCWRGASG
CACTTCCTCT---
 A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACSTCCWRGASG----
--TTTCCTGGAAAGNNN
 A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACSTCCWRGASG
-ACATCCTGNT--
 A G T C C G T A A G T C T A C G A C G T A G T C A G T C C G A T C T A G A C T G C G T A A T G C A C T G
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T