Information for 20-CCACAAGRCTTGCCYT (Motif 23)

A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
Reverse Opposite:
G T C A C T A G A C T G A C T G T G A C C G T A C G T A A C T G A G T C A G T C A G C T A C G T A C T G A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.766
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 18.2bp
Average Position of motif in Background51.7 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCACAAGRCTTGCCYT
-----NNACTTGCCTT
 A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCACAAGRCTTGCCYT
----GGGGATTTCC--
 A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCACAAGRCTTGCCYT
----GGGAATTTCC--
 A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CCACAAGRCTTGCCYT--
---------CTGCCCGCA
 A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCACAAGRCTTGCCYT
TGCCCCCGGGCA------
 A C G T A C G T A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CCACAAGRCTTGCCYT
----GGGGATTTCC--
 A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGRCTTGCCYT
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCACAAGRCTTGCCYT--
---NNGGCCACGCCTTTN
 A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGRCTTGCCYT
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGRCTTGCCYT
AAACCACAGAN--------
 A C G T A C G T A C G T A G T C G T A C G T C A A G T C G T C A C T G A A C T G C T A G G T A C G A C T A C G T A C T G A G T C A G T C A G T C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T