Information for 13-TGTCTGTAACTGAVAC (Motif 14)

C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
Reverse Opposite:
T C A G A C G T A G T C A C G T G T A C C G T A A C T G A C G T A G C T G T C A A G T C C G T A A C T G C G T A G T A C C G T A
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.785
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.4 +/- 22.8bp
Average Position of motif in Background71.3 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCTGTAACTGAVAC
TGTCTGDCACCT----
 C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGTAACTGAVAC
NNTNNTGTCTGGNNTNG----
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGTAACTGAVAC
CTGTCTGTCACCT----
 A C G T C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGTAACTGAVAC
VBSYGTCTGG---------
 A C G T A C G T A C G T C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGTCTGTAACTGAVAC-
-----GRAASTGAAAST
 C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGTAACTGAVAC
CTGTCTGG---------
 A C G T C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGTCTGTAACTGAVAC-
-----GAAACTGAAACT
 C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGTCTGTAACTGAVAC-
-----GGAAGTGAAAST
 C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGTCTGTAACTGAVAC-
-----GAAAMTGAAACT
 C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGTCTGTAACTGAVAC
----TGGAACAGMA--
 C G A T A C T G A C G T A G T C C G A T A C T G A C G T C T G A C G T A A G T C C G A T A C T G G T C A T C A G C G T A A G T C
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T