Information for 3-GTCCGCTCYGGCAGCC (Motif 6)

A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A G T C A G T C T C A G A C T G G T C A A C T G A G T C A T C G A C T G C G T A A T G C
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.3 +/- 24.6bp
Average Position of motif in Background51.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTCCGCTCYGGCAGCC
---GGCTCYAKCAYC-
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTCCGCTCYGGCAGCC
CAACGTCCGCGG--------
 A C G T A C G T A C G T A C G T A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.52
Offset:11
Orientation:forward strand
Alignment:GTCCGCTCYGGCAGCC
-----------CAGCC
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GTCCGCTCYGGCAGCC
-TGCCCCCGGGCA---
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GTCCGCTCYGGCAGCC
----GCTCCG------
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GTCCGCTCYGGCAGCC
NTNGCCTCAGGCNNN-
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GTCCGCTCYGGCAGCC
------CTTGGCAA--
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTCCGCTCYGGCAGCC
NTCGCCTCAGGCAAT-
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTCCGCTCYGGCAGCC
NTCCCCTCAGGGANT-
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTCCGCTCYGGCAGCC
-TCCGCCCCCGCATT-
 A T C G A C G T A G T C A T G C C T A G A G T C A C G T A G T C A G C T A C T G A C T G A G T C C G T A A C T G A G T C G T A C
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T