Information for 6-TGTCAGTCACGTGTCA (Motif 19)

A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
Reverse Opposite:
A C G T A C T G G C T A G T A C G T C A A G T C C A T G A G C T A T C G C G T A T G A C C G A T A T C G T C G A T A G C G T C A
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.681
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.7 +/- 23.3bp
Average Position of motif in Background57.5 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTCAGTCACGTGTCA
SCTGTCAVTCAV------
 A C G T A C G T A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGTCAGTCACGTGTCA-
---NNGTCGCGTGNCAC
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A A C G T
A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGTCAGTCACGTGTCA
----GGTCACATGAC-
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTCAGTCACGTGTCA
NCTGTCAATCAN------
 A C G T A C G T A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGTCAGTCACGTGTCA-
---NGATGACGTGGCAN
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A A C G T
A C G T A C G T A C G T A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGTCAGTCACGTGTCA
----GGTCACGTGGC-
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGTCAGTCACGTGTCA
-----GTCACGTGGM-
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGTCAGTCACGTGTCA
-----GTCACGTGAC-
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGTCAGTCACGTGTCA
----GGTCACGTGC--
 A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCAGTCACGTGTCA
CTGTCTGTCACCT----
 A C G T A C G T A C T G A G C T A T G C G C T A A C T G C G A T A T G C C T G A G T A C T C A G A C G T C A T G C A G T T A G C C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T