Information for 8-CGCTGGGGTA (Motif 13)

A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A G T C A G T C C G T A A C T G A G T C A T C G
p-value:1e-3
log p-value:-8.438e+00
Information Content per bp:1.959
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.5 +/- 24.6bp
Average Position of motif in Background42.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTA-
-GCTGTGGTTT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCTGGGGTA------
GCTGGGGGGTACCCCTT
 A C G T A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCTGGGGTA
NGCTN-----
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCTGGGGTA-
GTCTGTGGTTT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCTGGGGTA--
--CTGTGGTTTN
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTA--------
-GATGGGGTATCATTTTT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTA--------
-AATGGGGTATCACGTTT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTA
-GCTGTG---
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCTGGGGTA--
NNHTGTGGTTWN
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCTGGGGTA
WDNCTGGGCA-
 A C G T A T G C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T