Information for 1-CGAGGCCCCGCCCCHA (Motif 1)

A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
Reverse Opposite:
A C G T C A T G C A T G A C T G C T A G A C T G A G T C A C T G T C A G A C T G A C T G A G T C A G T C C G A T A G T C A T C G
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.848
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets45.4 +/- 20.3bp
Average Position of motif in Background42.9 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CGAGGCCCCGCCCCHA
---GGCCCCGCCCCC-
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CGAGGCCCCGCCCCHA
--NAGCCCCGCCCCCN
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CGAGGCCCCGCCCCHA
---GGCCACRCCCMK-
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGAGGCCCCGCCCCHA--
-TAAGCCACGCCCCCTTT
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGAGGCCCCGCCCCHA
-CAGGCCNNGGCCNN-
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CGAGGCCCCGCCCCHA
----GCCCCGCCCC--
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGAGGCCCCGCCCCHA-
-TCGACCCCGCCCCTAT
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A A C G T
A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CGAGGCCCCGCCCCHA
----GCCCCGCCCCC-
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CGAGGCCCCGCCCCHA
----GCCCCACCCA--
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A
A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CGAGGCCCCGCCCCHA-
--NRGCCCCRCCCHBNN
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C A G T C A G T C G T A C G A T C G T C A A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C