Information for 10-GMRCGTGACW (Motif 8)

A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
Reverse Opposite:
C G A T A C T G G C A T T G A C C G T A A G T C C A T G A G C T A C T G A T G C
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.704
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.04%
Number of Background Sequences with motif937.9
Percentage of Background Sequences with motif2.01%
Average Position of motif in Targets53.4 +/- 26.5bp
Average Position of motif in Background49.2 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEY2/MA0649.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GMRCGTGACW
GGCACGTGNC-
 A C G T A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GMRCGTGACW
NCACGTGACN
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GMRCGTGACW
--NCGTGACN
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GMRCGTGACW---
GCACGTGTCNNNN
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A A C G T A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GMRCGTGACW
-CACGTGDC-
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GMRCGTGACW
GCCACGTGACC
 A C G T A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GMRCGTGACW
GGCACGTGTC-
 A C G T A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GMRCGTGACW
-CACGTGNC-
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GMRCGTGACW
NCACGTGACN
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GMRCGTGACW
GCACGTGA--
 A T C G T G A C C T G A G T A C A C T G A C G T A C T G C G T A A G T C G C T A
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T