Information for 7-CCCGCCTCCTCCMTTM (Motif 13)

A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
Reverse Opposite:
A C G T C T G A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A C T A G C T A G A G T C A C T G A C T G A C T G
p-value:1e-7
log p-value:-1.633e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 14.4bp
Average Position of motif in Background70.1 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCTCCTCCMTTM
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCTCCTCCMTTM
CCCCCGCCCCCGCC----
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCCGCCTCCTCCMTTM-------
---GCCTCCTCCMTCWGACTGKS
 A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCGCCTCCTCCMTTM
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCTCCTCCMTTM
GCCCCGCCCCC-------
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCGCCTCCTCCMTTM
TCCGCCCCCGCATT--
 A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:7
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------CCCGCCTCCTCCMTTM
TCCTCCTCCCCCTCCTCCTCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCGCCTCCTCCMTTM
GGCCCCGCCCCC-------
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCTCCTCCMTTM
TACGCCCCGCCACTCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCGCCTCCTCCMTTM
TCCCCCCCCCCCCCC----
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C T G A C C G A T A G C T G T C A
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T A C G T A C G T