Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-178 | -4.100e+02 | 0.0000 | 176.0 | 18.88% | 374.7 | 0.79% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-132 | -3.060e+02 | 0.0000 | 199.0 | 21.35% | 988.0 | 2.08% | motif file (matrix) |
svg |
3 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-21 | -4.945e+01 | 0.0000 | 67.0 | 7.19% | 809.8 | 1.71% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-20 | -4.807e+01 | 0.0000 | 96.0 | 10.30% | 1592.9 | 3.36% | motif file (matrix) |
svg |
5 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-20 | -4.744e+01 | 0.0000 | 36.0 | 3.86% | 222.4 | 0.47% | motif file (matrix) |
svg |
6 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-19 | -4.489e+01 | 0.0000 | 104.0 | 11.16% | 1908.8 | 4.03% | motif file (matrix) |
svg |
7 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-15 | -3.630e+01 | 0.0000 | 92.0 | 9.87% | 1785.8 | 3.77% | motif file (matrix) |
svg |
8 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.494e+01 | 0.0000 | 111.0 | 11.91% | 2446.2 | 5.16% | motif file (matrix) |
svg |
9 |
| E-box(bHLH)/Promoter/Homer | 1e-12 | -2.939e+01 | 0.0000 | 35.0 | 3.76% | 380.7 | 0.80% | motif file (matrix) |
svg |
10 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.577e+01 | 0.0000 | 99.0 | 10.62% | 2396.4 | 5.05% | motif file (matrix) |
svg |
11 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-10 | -2.529e+01 | 0.0000 | 146.0 | 15.67% | 4172.8 | 8.80% | motif file (matrix) |
svg |
12 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.461e+01 | 0.0000 | 61.0 | 6.55% | 1177.0 | 2.48% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-10 | -2.416e+01 | 0.0000 | 31.0 | 3.33% | 366.5 | 0.77% | motif file (matrix) |
svg |
14 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.384e+01 | 0.0000 | 82.0 | 8.80% | 1886.1 | 3.98% | motif file (matrix) |
svg |
15 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-9 | -2.253e+01 | 0.0000 | 129.0 | 13.84% | 3673.2 | 7.75% | motif file (matrix) |
svg |
16 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-9 | -2.156e+01 | 0.0000 | 34.0 | 3.65% | 483.1 | 1.02% | motif file (matrix) |
svg |
17 |
| Sp1(Zf)/Promoter/Homer | 1e-8 | -2.057e+01 | 0.0000 | 89.0 | 9.55% | 2275.4 | 4.80% | motif file (matrix) |
svg |
18 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-8 | -2.009e+01 | 0.0000 | 33.0 | 3.54% | 486.1 | 1.03% | motif file (matrix) |
svg |
19 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-8 | -1.968e+01 | 0.0000 | 36.0 | 3.86% | 575.1 | 1.21% | motif file (matrix) |
svg |
20 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.816e+01 | 0.0000 | 163.0 | 17.49% | 5348.1 | 11.28% | motif file (matrix) |
svg |
21 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.809e+01 | 0.0000 | 33.0 | 3.54% | 529.4 | 1.12% | motif file (matrix) |
svg |
22 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.806e+01 | 0.0000 | 88.0 | 9.44% | 2365.1 | 4.99% | motif file (matrix) |
svg |
23 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-7 | -1.766e+01 | 0.0000 | 35.0 | 3.76% | 595.6 | 1.26% | motif file (matrix) |
svg |
24 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.756e+01 | 0.0000 | 21.0 | 2.25% | 238.0 | 0.50% | motif file (matrix) |
svg |
25 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.728e+01 | 0.0000 | 38.0 | 4.08% | 692.6 | 1.46% | motif file (matrix) |
svg |
26 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.656e+01 | 0.0000 | 112.0 | 12.02% | 3380.9 | 7.13% | motif file (matrix) |
svg |
27 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.601e+01 | 0.0000 | 85.0 | 9.12% | 2365.5 | 4.99% | motif file (matrix) |
svg |
28 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-6 | -1.588e+01 | 0.0000 | 169.0 | 18.13% | 5796.5 | 12.23% | motif file (matrix) |
svg |
29 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.508e+01 | 0.0000 | 20.0 | 2.15% | 253.5 | 0.53% | motif file (matrix) |
svg |
30 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.356e+01 | 0.0000 | 95.0 | 10.19% | 2908.9 | 6.14% | motif file (matrix) |
svg |
31 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.303e+01 | 0.0000 | 62.0 | 6.65% | 1668.4 | 3.52% | motif file (matrix) |
svg |
32 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.246e+01 | 0.0000 | 189.0 | 20.28% | 7016.4 | 14.80% | motif file (matrix) |
svg |
33 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.216e+01 | 0.0001 | 72.0 | 7.73% | 2097.6 | 4.42% | motif file (matrix) |
svg |
34 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-5 | -1.206e+01 | 0.0001 | 83.0 | 8.91% | 2535.2 | 5.35% | motif file (matrix) |
svg |
35 |
| CRE(bZIP)/Promoter/Homer | 1e-4 | -1.074e+01 | 0.0002 | 34.0 | 3.65% | 780.0 | 1.65% | motif file (matrix) |
svg |
36 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.050e+01 | 0.0003 | 80.0 | 8.58% | 2528.2 | 5.33% | motif file (matrix) |
svg |
37 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-4 | -1.046e+01 | 0.0003 | 16.0 | 1.72% | 237.0 | 0.50% | motif file (matrix) |
svg |
38 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.044e+01 | 0.0003 | 48.0 | 5.15% | 1289.3 | 2.72% | motif file (matrix) |
svg |
39 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.012e+01 | 0.0004 | 70.0 | 7.51% | 2155.8 | 4.55% | motif file (matrix) |
svg |
40 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-4 | -1.008e+01 | 0.0004 | 14.0 | 1.50% | 193.9 | 0.41% | motif file (matrix) |
svg |
41 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.700e+00 | 0.0005 | 21.0 | 2.25% | 397.9 | 0.84% | motif file (matrix) |
svg |
42 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.700e+00 | 0.0005 | 341.0 | 36.59% | 14529.6 | 30.65% | motif file (matrix) |
svg |
43 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.623e+00 | 0.0006 | 194.0 | 20.82% | 7592.7 | 16.02% | motif file (matrix) |
svg |
44 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -9.516e+00 | 0.0006 | 237.0 | 25.43% | 9599.0 | 20.25% | motif file (matrix) |
svg |
45 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -9.384e+00 | 0.0007 | 104.0 | 11.16% | 3623.1 | 7.64% | motif file (matrix) |
svg |
46 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-3 | -9.083e+00 | 0.0009 | 11.0 | 1.18% | 137.1 | 0.29% | motif file (matrix) |
svg |
47 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -8.933e+00 | 0.0010 | 7.0 | 0.75% | 55.4 | 0.12% | motif file (matrix) |
svg |
48 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.844e+00 | 0.0011 | 34.0 | 3.65% | 861.0 | 1.82% | motif file (matrix) |
svg |
49 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.612e+00 | 0.0014 | 19.0 | 2.04% | 368.3 | 0.78% | motif file (matrix) |
svg |
50 |
| GFY(?)/Promoter/Homer | 1e-3 | -8.594e+00 | 0.0014 | 14.0 | 1.50% | 223.7 | 0.47% | motif file (matrix) |
svg |
51 |
| NFY(CCAAT)/Promoter/Homer | 1e-3 | -8.580e+00 | 0.0014 | 56.0 | 6.01% | 1708.8 | 3.60% | motif file (matrix) |
svg |
52 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.565e+00 | 0.0014 | 80.0 | 8.58% | 2686.9 | 5.67% | motif file (matrix) |
svg |
53 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.237e+00 | 0.0018 | 5.0 | 0.54% | 28.3 | 0.06% | motif file (matrix) |
svg |
54 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-3 | -8.206e+00 | 0.0018 | 23.0 | 2.47% | 509.3 | 1.07% | motif file (matrix) |
svg |
55 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.666e+00 | 0.0031 | 7.0 | 0.75% | 68.9 | 0.15% | motif file (matrix) |
svg |
56 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -7.423e+00 | 0.0039 | 15.0 | 1.61% | 281.9 | 0.59% | motif file (matrix) |
svg |
57 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -7.204e+00 | 0.0047 | 25.0 | 2.68% | 618.0 | 1.30% | motif file (matrix) |
svg |
58 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.208e+00 | 0.0126 | 18.0 | 1.93% | 418.1 | 0.88% | motif file (matrix) |
svg |
59 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -6.137e+00 | 0.0133 | 4.0 | 0.43% | 27.7 | 0.06% | motif file (matrix) |
svg |
60 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.092e+00 | 0.0137 | 42.0 | 4.51% | 1330.5 | 2.81% | motif file (matrix) |
svg |
61 |
| NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-2 | -5.318e+00 | 0.0293 | 6.0 | 0.64% | 78.6 | 0.17% | motif file (matrix) |
svg |
62 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.312e+00 | 0.0293 | 33.0 | 3.54% | 1027.7 | 2.17% | motif file (matrix) |
svg |
63 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.211e+00 | 0.0315 | 9.0 | 0.97% | 162.2 | 0.34% | motif file (matrix) |
svg |
64 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.109e+00 | 0.0344 | 34.0 | 3.65% | 1082.1 | 2.28% | motif file (matrix) |
svg |
65 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.103e+00 | 0.0344 | 93.0 | 9.98% | 3633.7 | 7.66% | motif file (matrix) |
svg |
66 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.045e+00 | 0.0355 | 7.0 | 0.75% | 109.1 | 0.23% | motif file (matrix) |
svg |
67 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.019e+00 | 0.0359 | 63.0 | 6.76% | 2313.8 | 4.88% | motif file (matrix) |
svg |
68 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.952e+00 | 0.0378 | 47.0 | 5.04% | 1633.2 | 3.44% | motif file (matrix) |
svg |
69 |
| Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer | 1e-2 | -4.894e+00 | 0.0395 | 17.0 | 1.82% | 440.8 | 0.93% | motif file (matrix) |
svg |
70 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.815e+00 | 0.0422 | 38.0 | 4.08% | 1269.3 | 2.68% | motif file (matrix) |
svg |
71 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.736e+00 | 0.0450 | 12.0 | 1.29% | 272.2 | 0.57% | motif file (matrix) |
svg |
72 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -4.699e+00 | 0.0460 | 54.0 | 5.79% | 1958.8 | 4.13% | motif file (matrix) |
svg |