Information for 6-CTAGGCCCCGCCT (Motif 4)

A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C T G A C T G A T C G A C T G A G T C A G T C G C A T T G C A A C T G
p-value:1e-12
log p-value:-2.830e+01
Information Content per bp:1.877
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.0 +/- 15.6bp
Average Position of motif in Background43.9 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CTAGGCCCCGCCT--
---GGCCCCGCCCCC
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTAGGCCCCGCCT-----
-TACGCCCCGCCACTCTG
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTAGGCCCCGCCT---
--NAGCCCCGCCCCCN
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CTAGGCCCCGCCT------
----GCCCCGCCCCCTCCC
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTAGGCCCCGCCT---
-NNGGCCACGCCTTTN
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTAGGCCCCGCCT--
----GCCCCGCCCCC
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTAGGCCCCGCCT----
-TCGACCCCGCCCCTAT
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTAGGCCCCGCCT---
----GCTCCGCCCMCY
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTAGGCCCCGCCT--
---GGCCACRCCCMK
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTAGGCCCCGCCT-
----GCCCCGCCCC
 A G T C A C G T C G T A A C T G A C T G A G T C A T G C A G T C A G T C A C T G A G T C A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C