Information for 3-GRTCACGTGA (Motif 2)

C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A
Reverse Opposite:
A G C T A T G C T C G A A G T C A T C G A C G T A T C G T C G A A G T C G A T C
p-value:1e-25
log p-value:-5.769e+01
Information Content per bp:1.657
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif9.87%
Number of Background Sequences with motif1282.6
Percentage of Background Sequences with motif2.71%
Average Position of motif in Targets49.3 +/- 18.3bp
Average Position of motif in Background48.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GRTCACGTGA
GGTCACGTGA
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

TFE3/MA0831.1/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GRTCACGTGA-
-GTCACGTGNT
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A A C G T
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GRTCACGTGA
GGTCACGTGC
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

MLXIPL/MA0664.1/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:GRTCACGTGA-
-ATCACGTGAT
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A A C G T
A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--GRTCACGTGA
CCGGTCACGTGA
 A C G T A C G T C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

TFEC/MA0871.1/Jaspar

Match Rank:6
Score:0.94
Offset:1
Orientation:forward strand
Alignment:GRTCACGTGA-
-ATCACGTGAC
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A A C G T
A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C

BHLHE41/MA0636.1/Jaspar

Match Rank:7
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GRTCACGTGA-
-GTCACGTGAC
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A A C G T
A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GRTCACGTGA
GGTCACGTGG
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:9
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GRTCACGTGA-
BRGTCACGTGAC
 A C G T C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A A C G T
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GRTCACGTGA-
-GTCACGTGAT
 C T A G C T A G A G C T A T G C G T C A A T G C T C A G A G C T A T C G T C G A A C G T
A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T