Information for 6-CCAGAAAATCCGCCCC (Motif 19)

G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A T G C A C T G A C T G C G T A A C G T A C G T A C G T A G C T A G T C A C G T A T C G A C T G
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.5 +/- 20.3bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAAAATCCGCCCC
GNNAGCTAATCCCCCN-
 A C G T G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CCAGAAAATCCGCCCC-----
-----ATCCCCGCCCCTAAAA
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCAGAAAATCCGCCCC-----
----TCACCCCGCCCCAAATT
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCAGAAAATCCGCCCC----
---AAGCATACGCCCAACTT
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGAAAATCCGCCCC-
ATAGTTAATCCCCCTCA
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGAAAATCCGCCCC-
ATAGTTAATCCCCCNNA
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCAGAAAATCCGCCCC--
----NAGCCCCGCCCCCN
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCAGAAAATCCGCCCC------
-----GGTCCCGCCCCCTTCTC
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:8
Orientation:forward strand
Alignment:CCAGAAAATCCGCCCC------
--------TCCGCCCCCGCATT
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGAAAATCCGCCCC
---GGAAATCCCC---
 G T A C A T G C C G T A A C T G C T G A T C G A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T