Information for 12-CSCAGSGACAGCK (Motif 11)

A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
Reverse Opposite:
T G A C A C T G A G T C A C G T A C T G C G A T A G T C T A G C A T G C A C G T A C T G A T G C A C T G
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.847
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.4 +/- 22.5bp
Average Position of motif in Background51.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CSCAGSGACAGCK
-CCAGGAACAG--
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CSCAGSGACAGCK----
GATATTGACAGCTGCGT
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CSCAGSGACAGCK---
---NGNGACAGCTGCN
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CSCAGSGACAGCK
------CACAGN-
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CSCAGSGACAGCK
---VBTGWCAGCB
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CSCAGSGACAGCK----
-NNATTGACAGGTGCTT
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CSCAGSGACAGCK
----TTGACAGC-
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CSCAGSGACAGCK
----TTGACAGG-
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CSCAGSGACAGCK----
-GTATTGACAGCTNNTT
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:8
Orientation:forward strand
Alignment:CSCAGSGACAGCK
--------CAGCC
 A G T C T A C G A G T C G T C A A T C G A T C G A C T G C G T A G T A C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C