Information for 21-GTTGAAGGCCACA (Motif 40)

C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G A C T G A T G C A G T C A C G T A C G T A G T C G T C A C G T A A G T C
p-value:1e-6
log p-value:-1.554e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 31.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTTGAAGGCCACA
AAGTTCAAGGTCAGC
 A C G T A C G T C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTTGAAGGCCACA
----AAGGTCAC-
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTGAAGGCCACA
-NTCAAGGTCA--
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTTGAAGGCCACA
AGGTCAAGGTCA--
 A C G T C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTGAAGGCCACA
AGGTCAAGGTCA--
 A C G T C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTTGAAGGCCACA
---CAAGGHCANV
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTGAAGGCCACA
-BTCAAGGTCA--
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTGAAGGCCACA
--TCAAGGTCAN-
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTTGAAGGCCACA
--TCAAGGTCAT-
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTTGAAGGCCACA---
-----AAACCACAGAN
 C T A G A C G T C A G T A C T G C G T A C G T A A C T G A T C G A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C