Information for 16-CCTGTGGCCWCAGSAC (Motif 34)

A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
Reverse Opposite:
A T C G C G A T A T G C T A G C A G C T A T C G C G T A A C T G C T A G G T A C A G T C G T C A A T G C C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.859e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.1 +/- 23.5bp
Average Position of motif in Background46.2 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGCCWCAGSAC
TGACCTTTGACCTC-----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGCCWCAGSAC
TGACCTCTGACCCCN----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGTGGCCWCAGSAC
GCTGTG----------
 A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGCCWCAGSAC
TGACCTTTGCCCTA-----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTGTGGCCWCAGSAC
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGCCWCAGSAC
SCCTSAGGSCAW-----
 A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGCCWCAGSAC
TGACCTTTGACCTN-----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGCCWCAGSAC
GTCTGTGGTTT------
 A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGCCWCAGSAC
TGACCTTTGCCCTAN----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGCCWCAGSAC
TGACCTTTGACCCC-----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G A C G T A C T G C A T G A G T C A G T C G C A T A T G C C T G A A T C G A T C G C G T A A T G C
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T